I would definitely check with your doctor to be sure. All I know about it is that when you get tested for fertility they test you for chlamydia and gonorrhea because those are the ones that if they go untreated can cause infertility.You can have these particular stds for years and not know it, so if I were to venture a guess, I would say 2 weeks isn't long enough to cause you to be infertile. Still your doctor could give you the best answer to your question.
talk to your doc, I bet they know what to do in that situation