My understanding is that clomid can cause or worsen cysts and thin your lining. My RE doesnt even use it anymore. Femara is supposed to be better for the lining and cause less problems. I dont know if you will have to go for another lap. It depends on if the cyst is growing or not. Good luck to you.
i have one tube completely blocked and the other half blocked, i tried clomid for 3 months, and after those first 3 months due to the tubes being blocked my dr sent me straight to ICSI, he said i had very poor chance of getting pregnant on clomid. sorry not sure about the cysts.
Good luck i hope all goes well for you xx